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BaseInfo

ncRNA ID novel_zma_miR9937
Species Zea mays
Class miRNA
Genome position Chr10:26198666-26198788 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 25
Mature sequence(if miRNA) 99 - UUAACAUAGGAUGAAUUAGAACUUA - 123
Stem-loop(if miRNA) --   C              A                U      A       CAAUAUGAAG
  AGU CUAAUUCAUCCUAU UUAAAAGAUAUAAAAA GAGAAA UUUUGUC          A
  ||| |||||||||||||| |||||||||||||||| |||||| |||||||
  UCA GAUUAAGUAGGAUA AAUUUUCUAUAUUUUU CUCUUU AAAAUAG          A
AU   A              C                -      A       UAAAAAAAUU
Stem-loop sequence AGUCCUAAUUCAUCCUAUAUUAAAAGAUAUAAAAAUGAGAAAAUUUUGUCCAAUAUGAAGAAUUAAAAAAAUGAUAAAAAUUUCUCUUUUUAUAUCUUUUAACAUAGGAUGAAUUAGAACUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669948.2
ncRNA:25   AUUCAAGAUUAAGUAGGAUACAAUU   1
  ||||||||||||||||*||||||||
targets:1983   UAAGUUCUAAUUCAUCAUAUGUUAA   2007

1.5 PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669949.2
ncRNA:25   AUUCAAGAUUAAGUAGGAUACAAUU   1
  ||||||||||||||||*||||||||
targets:1968   UAAGUUCUAAUUCAUCAUAUGUUAA   1992

1.5 PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA NA coding protein psRNATarget