ncRNA ID | novel_zma_miR9937 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:26198666-26198788 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 25 |
Mature sequence(if miRNA) | 99 - UUAACAUAGGAUGAAUUAGAACUUA - 123 |
Stem-loop(if miRNA) |
--   C              A                U      A       CAAUAUGAAG   AGU CUAAUUCAUCCUAU UUAAAAGAUAUAAAAA GAGAAA UUUUGUC          A   ||| |||||||||||||| |||||||||||||||| |||||| |||||||   UCA GAUUAAGUAGGAUA AAUUUUCUAUAUUUUU CUCUUU AAAAUAG          A AU   A              C                -      A       UAAAAAAAUU |
Stem-loop sequence | AGUCCUAAUUCAUCCUAUAUUAAAAGAUAUAAAAAUGAGAAAAUUUUGUCCAAUAUGAAGAAUUAAAAAAAUGAUAAAAAUUUCUCUUUUUAUAUCUUUUAACAUAGGAUGAAUUAGAACUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669948.2 |
|
1.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008669949.2 |
|
1.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA | NA | coding protein | psRNATarget |