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BaseInfo

ncRNA ID novel_zma_miR9936
Species Zea mays
Class miRNA
Genome position Chr5:24875303-24875371 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - GGUUUAGGGCUUAUUUUUGGCGGU - 24
Stem-loop(if miRNA) --  A                     C A    U
  CG CGGGAAUAAGCCUUAAACCGA G GAAU A
  || ||||||||||||||||||||| | |||| G
  GC GUUUUUAUUCGGGAUUUGGUU C CUUA U
UG  G                     A C    A
Stem-loop sequence CGACGGGAAUAAGCCUUAAACCGACGAGAAUUAGUAAUUCCCAUUGGUUUAGGGCUUAUUUUUGGCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ240820.1
ncRNA:24   UGGCGGUUUUUAUUCGGGAUUUGG   1
  ||||*|===|||||||||||||||
targets:15   ACCGACGGGAAUAAGCCCUAAACC   38

3.0 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget
HI408690.1
ncRNA:24   UGGCGGUUUUUAUUCGGGAUUUGG   1
  ||||*|===|||||||||||||||
targets:15   ACCGACGGGAAUAAGCCCUAAACC   38

3.0 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget
JB169151.1
ncRNA:24   UGGCGGUUUUUAUUCGGGAUUUGG   1
  ||||*|===|||||||||||||||
targets:15   ACCGACGGGAAUAAGCCCUAAACC   38

3.0 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget