Search result

BaseInfo

ncRNA ID novel_zma_miR9925
Species Zea mays
Class miRNA
Genome position Chr5:157442322-157442369 [-]
Reference genome RefGen_v4
Source SRR4237227
Length 23
Mature sequence(if miRNA) 1 - AAUAGAGAGGGAGGGCAGAGUCC - 23
Stem-loop(if miRNA) --             A     UGG
  GCUCUGCCCUUCC UCUCU   A
  ||||||||||||| |||||   U
  UGAGACGGGAGGG AGAGA   A
CC             -     UAA
Stem-loop sequence GCUCUGCCCUUCCAUCUCUUGGAUAAAUAGAGAGGGAGGGCAGAGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001143238.1
ncRNA:23   CCUGAGACGGGAGGGAGAGAUAA   1
  ***||||||=|||=|||||||||
targets:211   CUUCUCUGCUCUCUCUCUCUAUU   233

2.5 Zea mays uncharacterized LOC100216846 (LOC100216846), mRNA NA coding protein psRNATarget
BT037442.1
ncRNA:23   CCUGAGACGGGAGGGAGAGAUAA   1
  ***||||||=|||=|||||||||
targets:211   CUUCUCUGCUCUCUCUCUCUAUU   233

2.5 Zea mays full-length cDNA clone ZM_BFb0169H15 mRNA, complete cds NA coding protein psRNATarget