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BaseInfo

ncRNA ID novel_zma_miR9923
Species Zea mays
Class miRNA
Genome position Chr5:17853282-17853376 [+]
Reference genome RefGen_v4
Source SRR4237227
Length 20
Mature sequence(if miRNA) 76 - CUGAAGAAGAUUUGAGUUUC - 95
Stem-loop(if miRNA) -AAC        CC             U A     AG U     UAA
    CUCAAAUC  CUUCAGGAUUGAA G GAUUG  G AGAAA   A
    ||||||||  ||||||||||||| | |||||  | |||||   C
    GAGUUUAG  GAAGUCCUAACUU C CUAAC  C UCUUU   U
CUUU        AA             C C     CU -     UAA
Stem-loop sequence AACCUCAAAUCCCCUUCAGGAUUGAAUGAGAUUGAGGUAGAAAUAAACUAAUUUUCUCUCCAAUCCCCUUCAAUCCUGAAGAAGAUUUGAGUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008656459.2
ncRNA:20   CUUUGAGUUUAGAAGAAGUC   1
  *|||=|=||||||||||||*
targets:574   AAAAUUUAAAUCUUCUUCAA   593

3.0 PREDICTED: Zea mays transducin family protein / WD-40 repeat family protein (LOC103634524), mRNA NA coding protein psRNATarget