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BaseInfo

ncRNA ID	osa-miRf10589-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - AACGAGGGGAUAUCCCAUCGAG - NA
Stem-loop(if miRNA)	G    CG            U  CAUGCCACUCAAAUAGUUA    AAAGUUCAACAAGA AAAUUCUCGA GGGA  UCUCCUCGUUGU UA                   UGAA              U |||||||||| ||||  |||||||||||| ||                   ||||              C UUUGAGAGCU CCCU  AGGGGAGCAACA AU                   CUAG              G           A    AU            U  -----------------CA    AUAGUGUAUAACUA
Stem-loop sequence	AAAUUCUCGAGGGGACGUCUCCUCGUUGUUUACAUGCCACUCAAAUAGUUAUGAAAAAGUUCAACAAGAUCGAUCAAUAUGUGAUAGAUCACUAUACAACGAGGGGAUAUCCCAUCGAGAGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK109561.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||||||||||| targets:1491   CUCGAGGGGAUAUCCCCUCGUU   1512 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:002-127-E02, full insert sequence	NA	coding protein	psRNATarget
XM_015792164.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||||||||||| targets:2256   CUCGAGGGGAUAUCCCCUCGUU   2277 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group WAS/WASL-interacting protein family member 1 (LOC9271891), mRNA	WAS/WASL-interacting protein family member 1(LOC9271891)	coding protein	psRNATarget
AK241681.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   ||*||||||||||||||||||| targets:875   CUGGAUGGGAUAUCCCCUCGUU   896 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J065193N01, full insert sequence	NA	coding protein	psRNATarget
CT832936.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||=|||||||| targets:266   CUCGAGGGGAUAUUCCCUCGUU   287 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN055M04, full insert sequence	NA	coding protein	psRNATarget
XM_015793191.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   ||=||*|||||||||||||||| targets:336   CUUGAGGGGAUAUCCCCUCGUU   357 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X1, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget
XM_015755787.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||=|||||||| targets:1932   CUCGAGGGGAUAUUCCCUCGUU   1953 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group potassium transporter 18 (LOC4347862), transcript variant X3, mRNA	potassium transporter 18(LOC4347862)	coding protein	psRNATarget
XM_015755786.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||=|||||||| targets:2667   CUCGAGGGGAUAUUCCCUCGUU   2688 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group potassium transporter 18 (LOC4347862), transcript variant X2, mRNA	potassium transporter 18(LOC4347862)	coding protein	psRNATarget
XM_015793197.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   ||=||*|||||||||||||||| targets:338   CUUGAGGGGAUAUCCCCUCGUU   359 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X2, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget
XM_015755785.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||=|||||||| targets:2913   CUCGAGGGGAUAUUCCCUCGUU   2934 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group potassium transporter 18 (LOC4347862), transcript variant X1, mRNA	potassium transporter 18(LOC4347862)	coding protein	psRNATarget
CT834684.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||||||||||* targets:775   CUCGAGGGGAUAUCCCCUCGUA   796 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN064H11, full insert sequence	NA	coding protein	psRNATarget
CT833676.1	ncRNA:22   GAGCUACCCUAUAGGGGAGCAA   1   |||||*|||||||||||||||* targets:772   CUCGAGGGGAUAUCCCCUCGUA   793 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA041C07, full insert sequence	NA	coding protein	psRNATarget