Search result

BaseInfo

ncRNA ID	novel_zma_miR9913
Species	Zea mays
Class	miRNA
Genome position	Chr4:140777495-140777554 [-]
Reference genome	RefGen_v4
Source	SRR4237227
Length	24
Mature sequence(if miRNA)	1 - ACUCGACAAAGAACUCUUUACCGA - 24
Stem-loop(if miRNA)	--                C          G   GGUAAAGAGUUCUUUG CGAGUGCCAA U   |||||||||||||||| ||||||||||   CCAUUUCUCAAGAAAC GCUCACGGUU A AG                A          U
Stem-loop sequence	GGUAAAGAGUUCUUUGCCGAGUGCCAAGUAUUUGGCACUCGACAAAGAACUCUUUACCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU949560.1	ncRNA:24   AGCCAUUUCUCAAGAAACAGCUCA   1   ||||*||||=||||||||*||||| targets:582   UCGGCAAAGGGUUCUUUGCCGAGU   605 Target Full Sequence	2.5	Zea mays clone 424771 mRNA sequence	NA	coding protein	psRNATarget
XM_008672265.2	ncRNA:24   AGCCAUUUCU-CAAGAAACAGCUCA   1   *|||*|||*|-|||||||||||||| targets:423   ACGGCAAAAAAGUUCUUUGUCGAGU   447 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008672266.2	ncRNA:24   AGCCAUUUCU-CAAGAAACAGCUCA   1   *|||*|||*|-|||||||||||||| targets:675   ACGGCAAAAAAGUUCUUUGUCGAGU   699 Target Full Sequence	3.0	PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X2, mRNA	NA	coding protein	psRNATarget