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BaseInfo

ncRNA ID novel_zma_miR9912
Species Zea mays
Class miRNA
Genome position Chr10:100232018-100232141 [+]
Reference genome RefGen_v4
Source SRR4237227
Length 21
Mature sequence(if miRNA) 104 - AUCCAUGAUCACUAAAUCAGC - 124
Stem-loop(if miRNA) --              G     C G       A          GA         C      A
  UGAUUUGGUGAUCA GGAUC U AGGGGAU UAUGGGGGAG  AUCCCCUUG UAUUCA A
  |||||||||||||| ||||| | ||||||| ||||||||||  ||||||||| ||||||
  ACUAAAUCACUAGU CCUAG G UCUCCUA GUACUCCCUC  UAGGGGAAC AUAAGU U
CG              A     U G       G          AC         A      U
Stem-loop sequence UGAUUUGGUGAUCAGGGAUCCUGAGGGGAUAUAUGGGGGAGGAAUCCCCUUGCUAUUCAAAUUUGAAUAACAAGGGGAUCACUCCCUCAUGGAUCCUCUGGUGAUCCAUGAUCACUAAAUCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU953003.1
ncRNA:21   CGACUAAAUCACUAGUACCUA   1
  *|*||||||||||||||||=|
targets:1318   UCGGAUUUAGUGAUCAUGGGU   1338

2.5 Zea mays clone 1374585 mRNA sequence NA coding protein psRNATarget
EU943718.1
ncRNA:21   CGACUAAAUCACUAGUACCUA   1
  **|||*||||||||||||*||
targets:234   AGUGAAUUAGUGAUCAUGAAU   254

2.5 Zea mays clone 1681395 mRNA sequence NA coding protein psRNATarget