ncRNA ID | novel_zma_miR9907 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:131072752-131072813 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237227 |
Length | 24 |
Mature sequence(if miRNA) | 39 - ACUCGACAAAGAACUCUUUACCGA - 62 |
Stem-loop(if miRNA) |
--  C      AC       C          A   GG AAAGAG  UUCUUUG CGAGUGCCAA U   || ||||||  ||||||| ||||||||||   CC UUUCUC  AAGAAAC GCUCACGGUU A AG  A      --       A          U |
Stem-loop sequence | GGCAAAGAGACUUCUUUGCCGAGUGCCAAAUAUUUGGCACUCGACAAAGAACUCUUUACCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU949560.1 |
|
2.5 | Zea mays clone 424771 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008672265.2 |
|
3.0 | PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008672266.2 |
|
3.0 | PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X2, mRNA | NA | coding protein | psRNATarget |