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BaseInfo

ncRNA ID	novel_zma_miR9892
Species	Zea mays
Class	miRNA
Genome position	Chr10:713074-713151 [-]
Reference genome	RefGen_v4
Source	SRR4237227;SRR1583942
Length	21
Mature sequence(if miRNA)	58 - UCUGGCUAGAUUAUAUAAUCC - 78
Stem-loop(if miRNA)	--    G         AUAAUCCAAC        AACUUA   UCUG CUAGAUUAU          AAAAUUUG      U   |||| |||||||||          ||||||||   AGAC GGUCUAAUA          UUUUAAAC      A UU    A         --GAAUUAAA        AACCUA
Stem-loop sequence	UCUGGCUAGAUUAUAUAAUCCAACAAAAUUUGAACUUAUAAUCCAACAAAUUUUAAAUUAAGAUAAUCUGGACAGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU944939.1	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   ||||||||||||||||*|||| targets:788   GGAUUAUAUAAUCUAGGCAGA   808 Target Full Sequence	1.5	Zea mays clone 235800 mRNA sequence	NA	coding protein	psRNATarget
XM_008660268.2	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   |*||||||||||||=|||||| targets:3131   GAAUUAUAUAAUCUGGCCAGA   3151 Target Full Sequence	1.5	PREDICTED: Zea mays WW domain-containing protein (LOC100279861), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008669523.2	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   *|||||||||||||||*|||| targets:2108   AGAUUAUAUAAUCUAGACAGA   2128 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (LOC100278420), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546835.1	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   *|||||*|||||=|||||||| targets:966   AGAUUAAAUAAUUUAGCCAGA   986 Target Full Sequence	2.5	PREDICTED: Zea mays WAT1-related protein At5g64700-like (LOC109943524), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547943.1	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   |*||||||||||||||*|||| targets:3414   GAAUUAUAUAAUCUAGACAGA   3434 Target Full Sequence	1.5	PREDICTED: Zea mays Leucine-rich repeat transmembrane protein kinase (LOC100384732), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547944.1	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   |*||||||||||||||*|||| targets:3399   GAAUUAUAUAAUCUAGACAGA   3419 Target Full Sequence	1.5	PREDICTED: Zea mays Leucine-rich repeat transmembrane protein kinase (LOC100384732), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547945.1	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   |*||||||||||||||*|||| targets:3270   GAAUUAUAUAAUCUAGACAGA   3290 Target Full Sequence	1.5	PREDICTED: Zea mays Leucine-rich repeat transmembrane protein kinase (LOC100384732), transcript variant X3, mRNA	NA	coding protein	psRNATarget
NM_001177200.1	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   |*||||||||||||||*|||| targets:1285   GAAUUAUAUAAUCUAGACAGA   1305 Target Full Sequence	1.5	Zea mays Leucine-rich repeat transmembrane protein kinase (LOC100384732), mRNA	NA	coding protein	psRNATarget
BT084075.1	ncRNA:21   CCUAAUAUAUUAGAUCGGUCU   1   |*||||||||||||||*|||| targets:1285   GAAUUAUAUAAUCUAGACAGA   1305 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0071H15 mRNA, complete cds	NA	coding protein	psRNATarget