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BaseInfo

ncRNA ID	novel_zma_miR9891
Species	Zea mays
Class	miRNA
Genome position	Chr2:60337442-60337532 [+]
Reference genome	RefGen_v4
Source	SRR4237227
Length	22
Mature sequence(if miRNA)	70 - GUUCUGGUUAAUCAUAAUGAUC - 91
Stem-loop(if miRNA)	UCAU     --------U  C ---  AAUCUCAAGUCCCAGGCAAGUUGUG     CCUGG         AC U   GG                         C     |||||         || |   ||                         C     CUAGU         UG G   UG                         C ----     AAUACUAAU  - UCU  UACUCAUCCAUUUUCUUCACUAGUU
Stem-loop sequence	UCAUCCUGGUACCUGGAAUCUCAAGUCCCAGGCAAGUUGUGCCCUUGAUCACUUCUUUUACCUACUCAUGUUCUGGUUAAUCAUAAUGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940868.1	ncRNA:22   CUAGUAAUACUAAUUGGUCUUG   1   |||||||||||||||=|||||| targets:1882   GAUCAUUAUGAUUAAUCAGAAC   1903 Target Full Sequence	1.5	Zea mays clone 1165273 mRNA sequence	NA	coding protein	psRNATarget
NM_001175762.1	ncRNA:22   CUAGUAAUACUAAUUGGUCUUG   1   |||||||||||||||=|||||| targets:1079   GAUCAUUAUGAUUAAUCAGAAC   1100 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383091 (LOC100383091), mRNA	NA	coding protein	psRNATarget
BT066164.2	ncRNA:22   CUAGUAAUACUAAUUGGUCUUG   1   |||||||||||||||=|||||| targets:1079   GAUCAUUAUGAUUAAUCAGAAC   1100 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0047C23 mRNA, complete cds	NA	coding protein	psRNATarget
EU940891.1	ncRNA:22   CUAGUAAUACUAAUUGGUCUUG   1   |||||||||||||||=|||||| targets:1379   GAUCAUUAUGAUUAAUCAGAAC   1400 Target Full Sequence	1.5	Zea mays clone 1166454 mRNA sequence	NA	coding protein	psRNATarget
EZ077732.1	ncRNA:22   CUAGUAAUACUAAUUGGUCUUG   1   |||||||||||||||=|||||| targets:18   GAUCAUUAUGAUUAAUCAGAAC   39 Target Full Sequence	1.5	TSA: Zea mays contig13371, mRNA sequence	NA	coding protein	psRNATarget
EU084957.1	ncRNA:22   CUAGUAAUACUAAUUGGUCUUG   1   |***||||||||*||||||||| targets:773   GUAGAUUAUGAUGAACCAGAAC   794 Target Full Sequence	2.5	Zea mays CRM family member 3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001112591.1	ncRNA:22   CUAGUAAUACUAAUUGGUCUUG   1   |***||||||||*||||||||| targets:773   GUAGAUUAUGAUGAACCAGAAC   794 Target Full Sequence	2.5	Zea mays CRM family member 3 (CFM3), mRNA	NA	coding protein	psRNATarget