Search result

BaseInfo

ncRNA ID	osa-miRf10586-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GUCCCAUCCGAUCCUAGGUUG - NA
Stem-loop(if miRNA)	A      G         A  A   CA AAAUAUAAUAACUUAGGAUC GAUGGG ACGUUUCCU GU CUA  A |||||||||||||||||||| |||||| ||||||||| || ||| UUUAUAUUGUUGGAUCCUAG CUACCC UGCAAAGGA CA GGU  A                     C      -         -  -   CU
Stem-loop sequence	AAAUAUAAUAACUUAGGAUCAGAUGGGGACGUUUCCUAGUACUACAAAUCUGGACAGGAAACGUCCCAUCCGAUCCUAGGUUGUUAUAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235987.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=||||||||||||||||| targets:36   CAAUCUAGGAUCGGAUGGGAC   56 Target Full Sequence	1.0	Sequence 1982 from Patent EP2985353	NA	coding protein	psRNATarget
JB164318.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=||||||||||||||||| targets:36   CAAUCUAGGAUCGGAUGGGAC   56 Target Full Sequence	1.0	Sequence 1982 from Patent EP2559767	NA	coding protein	psRNATarget
HI403857.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=||||||||||||||||| targets:36   CAAUCUAGGAUCGGAUGGGAC   56 Target Full Sequence	1.0	Sequence 1982 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236176.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||||||||||*||||||||| targets:6   CAACCUAGGAUGGGAUGGGAC   26 Target Full Sequence	1.5	Sequence 2171 from Patent EP2985353	NA	coding protein	psRNATarget
HI404046.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||||||||||*||||||||| targets:6   CAACCUAGGAUGGGAUGGGAC   26 Target Full Sequence	1.5	Sequence 2171 from Patent EP2074227	NA	coding protein	psRNATarget
JB164507.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||||||||||*||||||||| targets:6   CAACCUAGGAUGGGAUGGGAC   26 Target Full Sequence	1.5	Sequence 2171 from Patent EP2559767	NA	coding protein	psRNATarget
JB164667.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||||||||||*||||||||| targets:29   CAACCUAGGAUGGGAUGGGAC   49 Target Full Sequence	1.5	Sequence 2331 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236336.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||||||||||*||||||||| targets:29   CAACCUAGGAUGGGAUGGGAC   49 Target Full Sequence	1.5	Sequence 2331 from Patent EP2985353	NA	coding protein	psRNATarget
HI404206.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||||||||||*||||||||| targets:29   CAACCUAGGAUGGGAUGGGAC   49 Target Full Sequence	1.5	Sequence 2331 from Patent EP2074227	NA	coding protein	psRNATarget
CT832625.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=|||||||||||||*||| targets:960   CAAUCUAGGAUCGGAUGUGAC   980 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA103G17, full insert sequence	NA	coding protein	psRNATarget
AK119669.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=|||||||||||||*||| targets:960   CAAUCUAGGAUCGGAUGUGAC   980 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-149-H06, full insert sequence	NA	coding protein	psRNATarget
AK069814.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=|||||||||||||*||| targets:961   CAAUCUAGGAUCGGAUGUGAC   981 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023031G07, full insert sequence	NA	coding protein	psRNATarget
AK119584.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=|||||||||||||*||| targets:965   CAAUCUAGGAUCGGAUGUGAC   985 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-117-C06, full insert sequence	NA	coding protein	psRNATarget
CT832623.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=|||||||||||||*||| targets:955   CAAUCUAGGAUCGGAUGUGAC   975 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA053E04, full insert sequence	NA	coding protein	psRNATarget
CT832624.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=|||||||||||||*||| targets:960   CAAUCUAGGAUCGGAUGUGAC   980 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA053I23, full insert sequence	NA	coding protein	psRNATarget
XM_015783830.1	ncRNA:21   GUUGGAUCCUAGCCUACCCUG   1   |||=|||||||||||||*||| targets:1070   CAAUCUAGGAUCGGAUGUGAC   1090 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4337946 (LOC4337946), mRNA	uncharacterized LOC4337946(LOC4337946)	coding protein	psRNATarget