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BaseInfo

ncRNA ID novel_zma_miR9879
Species Zea mays
Class miRNA
Genome position Chr10:61396918-61397029 [-]
Reference genome RefGen_v4
Source SRR4237227
Length 23
Mature sequence(if miRNA) 90 - AAUAAACUUACUUCCGACGGCCC - 112
Stem-loop(if miRNA) AAUAAAC              -----------          ---    ------        UC
       UUACUUCCGACGGC           CCCGUCGGAA   ACGC      GGAUACUU  G
       ||||||||||||||           ||||||||||   ||||      ||||||||
       AAUGAAGGCUGCCG           GGGCAGCCUU   UGCG      CCUAUGGG  A
CUUCAUC              AAUUCCGCCCA          CAU    GCAUCC        UC
Stem-loop sequence AAUAAACUUACUUCCGACGGCCCCGUCGGAAACGCGGAUACUUUCGACUGGGUAUCCCCUACGGCGUUACUUCCGACGGGACCCGCCUUAAGCCGUCGGAAGUAACUACUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ081116.1
ncRNA:23   CCCGGCAGCCUUCAUUCAAAUAA   1
  |**|||*|*|||||||||||||*
targets:24   GCACCGGCCGAAGUAAGUUUAUG   46

3.0 TSA: Zea mays contig16756, mRNA sequence NA coding protein psRNATarget