ncRNA ID | novel_zma_miR9879 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:61396918-61397029 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237227 |
Length | 23 |
Mature sequence(if miRNA) | 90 - AAUAAACUUACUUCCGACGGCCC - 112 |
Stem-loop(if miRNA) |
AAUAAAC              -----------          ---    ------        UC        UUACUUCCGACGGC           CCCGUCGGAA   ACGC      GGAUACUU  G        ||||||||||||||           ||||||||||   ||||      ||||||||        AAUGAAGGCUGCCG           GGGCAGCCUU   UGCG      CCUAUGGG  A CUUCAUC              AAUUCCGCCCA          CAU    GCAUCC        UC |
Stem-loop sequence | AAUAAACUUACUUCCGACGGCCCCGUCGGAAACGCGGAUACUUUCGACUGGGUAUCCCCUACGGCGUUACUUCCGACGGGACCCGCCUUAAGCCGUCGGAAGUAACUACUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ081116.1 |
|
3.0 | TSA: Zea mays contig16756, mRNA sequence | NA | coding protein | psRNATarget |