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BaseInfo

ncRNA ID novel_zma_miR9873
Species Zea mays
Class miRNA
Genome position Chr1:66940376-66940470 [-]
Reference genome RefGen_v4
Source SRR4237227
Length 24
Mature sequence(if miRNA) 1 - AGGAACCGCCAGUAGAAAUAUGAU - 24
Stem-loop(if miRNA) --          G                         G  G     
  CGUAUUUCUA UGGCGGUUCCUUAAGAAAACUGUCA UA AAAUCC
  |||||||||| ||||||||||||||||||||||||| || |||||A
  GUAUAAAGAU ACCGCCAAGGAAUUCUUUUGGCGGU AU UUUAGU
UA          G                         G  G     
Stem-loop sequence CGUAUUUCUAGUGGCGGUUCCUUAAGAAAACUGUCAGUAGAAAUCCAUGAUUUGUAGUGGCGGUUUUCUUAAGGAACCGCCAGUAGAAAUAUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI402984.1
ncRNA:24   UAGUAUAAAGAUGACCGCCAAGGA   1
  |||||||||||||*||||||||||
targets:31   AUCAUAUUUCUACAGGCGGUUCCU   54

1.5 Sequence 1109 from Patent EP2074227 NA coding protein psRNATarget
LQ235114.1
ncRNA:24   UAGUAUAAAGAUGACCGCCAAGGA   1
  |||||||||||||*||||||||||
targets:31   AUCAUAUUUCUACAGGCGGUUCCU   54

1.5 Sequence 1109 from Patent EP2985353 NA coding protein psRNATarget
JB163445.1
ncRNA:24   UAGUAUAAAGAUGACCGCCAAGGA   1
  |||||||||||||*||||||||||
targets:31   AUCAUAUUUCUACAGGCGGUUCCU   54

1.5 Sequence 1109 from Patent EP2559767 NA coding protein psRNATarget