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BaseInfo

ncRNA ID novel_zma_miR9865
Species Zea mays
Class miRNA
Genome position Chr1:227431920-227431980 [-]
Reference genome RefGen_v4
Source SRR4237227
Length 21
Mature sequence(if miRNA) 41 - UUCUGACUUCUGGCCCCUGCU - 61
Stem-loop(if miRNA) --      CU         U   C  CUCC
  UUCUGA  UCUGGCCCC GCU AG    A
  ||||||  ||||||||| ||| ||    C
  AAGACU  AGACCGGGG CGA UC    C
CG      CU         C   A  ACAA
Stem-loop sequence UUCUGACUUCUGGCCCCUGCUCAGCUCCACCAACACUAAGCCGGGGCCAGAUCUCAGAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ516772.1
ncRNA:21   UCGUCCCCGGUCUUCAGUCUU   1
  |||||||||||||||||||||
targets:114   AGCAGGGGCCAGAAGUCAGAA   134

0.0 TSA: Zea mays cultivar W22 CL164Contig1.betc, mRNA sequence NA coding protein psRNATarget