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BaseInfo

ncRNA ID	novel_zma_miR9862
Species	Zea mays
Class	miRNA
Genome position	Chr1:304472071-304472131 [-]
Reference genome	RefGen_v4
Source	SRR4237227
Length	24
Mature sequence(if miRNA)	1 - AAGGAAUUAGAACGGAAUGGCUCC - 24
Stem-loop(if miRNA)	--AA         C C     UG    UGU     CCGUUCUGU C AGUUU  UUGU   U     ||||||||| | |||||  ||||   U     GGUAAGGCA G UUAAG  AACA   G CCUC         A A     GA    UUG
Stem-loop sequence	AACCGUUCUGUCCCAGUUUUGUUGUUGUUUGGUUACAAAGGAAUUAGAACGGAAUGGCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020546669.1	ncRNA:24   CCUCGGUAAGGCAAGAUUAAGGAA   1   ||||=||||=|||||||=|||||| targets:27   GGAGUCAUUUCGUUCUAGUUCCUU   50 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103643194), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT039460.1	ncRNA:24   CCUCGGUAAGGCAAGAUUAAGGAA   1   *||-=|||*|=||||||||||||* targets:1213   AGA-UCAUGCUGUUCUAAUUCCUG   1235 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0014I03 mRNA, complete cds	NA	coding protein	psRNATarget
BT017961.1	ncRNA:24   CCUCGGUAAGGCAAGAUUAAGGAA   1   *||-=|||*|=||||||||||||* targets:1244   AGA-UCAUGCUGUUCUAAUUCCUG   1266 Target Full Sequence	3.0	Zea mays clone EL01N0523C03.c mRNA sequence	NA	coding protein	psRNATarget
NM_001156533.1	ncRNA:24   CCUCGGUAAGGCAAGAUUAAGGAA   1   *||-=|||*|=||||||||||||* targets:1263   AGA-UCAUGCUGUUCUAAUUCCUG   1285 Target Full Sequence	3.0	Zea mays cycloeucalenol cycloisomerase (LOC100283632), mRNA	NA	coding protein	psRNATarget
EU965359.1	ncRNA:24   CCUCGGUAAGGCAAGAUUAAGGAA   1   *||-=|||*|=||||||||||||* targets:1263   AGA-UCAUGCUGUUCUAAUUCCUG   1285 Target Full Sequence	3.0	Zea mays clone 285554 cycloeucalenol cycloisomerase mRNA, complete cds	NA	coding protein	psRNATarget
XM_008649682.2	ncRNA:24   CCUCGGUAAGGCAAGAUUAAGGAA   1   *||-=|||*|=||||||||||||* targets:1341   AGA-UCAUGCUGUUCUAAUUCCUG   1363 Target Full Sequence	3.0	PREDICTED: Zea mays cycloeucalenol cycloisomerase (LOC100283632), transcript variant X1, mRNA	NA	coding protein	psRNATarget
AY109729.1	ncRNA:24   CCUCGGUAAGGCAAGAUUAAGGAA   1   *||-=||*|||||||||*|||||| targets:698   UGA-UCAAUCCGUUCUACUUCCUU   720 Target Full Sequence	2.5	Zea mays CL17488_1 mRNA sequence	NA	coding protein	psRNATarget