| ncRNA ID | novel_zma_miR9840 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr8:23198851-23198934 [+] |
| Reference genome | RefGen_v4 |
| Source | SRR4237227 |
| Length | 22 |
| Mature sequence(if miRNA) | 63 - UCCAAUCCUCCUGUGAUCCCCU - 84 |
| Stem-loop(if miRNA) |
-- G A UA GGGAUCA AGGAGGAUUGGAGGGGAUUGAGGG GAAAU G ||||||| |||||||||||||||||||||||| ||||| CCCUAGU UCCUCCUAACCUUCCCUAACUCCC CUUUA U UC G C CU |
| Stem-loop sequence | GGGAUCAGAGGAGGAUUGGAGGGGAUUGAGGGAGAAAUUAGUUCAUUUCCCCCUCAAUCCCUUCCAAUCCUCCUGUGAUCCCCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BT039623.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFc0035A18 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| NM_001147318.1 |
|
1.5 | Zea mays uncharacterized LOC100272865 (LOC100272865), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_020537910.1 |
|
1.5 | PREDICTED: Zea mays cytochrome P450 87A3-like (LOC109939182), mRNA | NA | coding protein | psRNATarget | |||||||||
| HI409663.1 |
|
2.5 | Sequence 7788 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| LQ241793.1 |
|
2.5 | Sequence 7788 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| JB170124.1 |
|
2.5 | Sequence 7788 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
| EU961132.1 |
|
2.5 | Zea mays clone 232865 phospholipid hydroperoxide glutathione peroxidase mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| BT040716.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0120F10 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| BT066291.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0176M03 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| NM_001147738.1 |
|
2.5 | Zea mays putative glutathione peroxidase (LOC100273297), mRNA | NA | coding protein | psRNATarget | |||||||||
| EU973567.1 |
|
2.5 | Zea mays clone 401029 mRNA sequence | NA | coding protein | psRNATarget |