ncRNA ID | novel_zma_miR9838 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:179283369-179283434 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237227 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUAUGGGCUGUGCCGUGCCAGC - 24 |
Stem-loop(if miRNA) |
--    A              CCA  A  -  UGC   AAUU UGGGCUGUGCCGUG   GC CG UG   C   |||| ||||||||||||||   || || ||   UUAA ACCCGGCACGGCAC   CG GC AC   C GA    C              --C  -  U  UGA |
Stem-loop sequence | AAUUAUGGGCUGUGCCGUGCCAGCACGUGUGCCCAGUCAUCGGCCCACGGCACGGCCCACAAUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020547541.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020548662.1 |
|
2.5 | PREDICTED: Zea mays respiratory burst oxidase homolog protein B (LOC103648044), transcript variant X1, mRNA | NA | coding protein | psRNATarget |