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BaseInfo

ncRNA ID novel_zma_miR9829
Species Zea mays
Class miRNA
Genome position Chr5:165390801-165390859 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 36 - UUUGUCGAGUGCUGUCAGGCAGAC - 59
Stem-loop(if miRNA) --           C G     CA   A  CC
  UUUGUCGAGUG U UCAGG  GAC CU  G
  ||||||||||| | |||||  ||| ||
  AAACGGCUCAC A GGUCC  CUG GA  C
AG           - G     -A   -  AA
Stem-loop sequence UUUGUCGAGUGCUGUCAGGCAGACACUCCGCAAAGGUCACCUGGGACACUCGGCAAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167100.1
ncRNA:24   CAGACGGACUGUCGUGAGCUGUUU   1
  |||*|||||||||||||||=||||
targets:74   GUCAGCCUGACAGCACUCGGCAAA   97

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   CAGACGGACUGUCGUGAGCUGUUU   1
  |||*|||||||||||||||=||||
targets:74   GUCAGCCUGACAGCACUCGGCAAA   97

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
HI406639.1
ncRNA:24   CAGACGGACUGUCGUGAGCUGUUU   1
  |||*|||||||||||||||=||||
targets:74   GUCAGCCUGACAGCACUCGGCAAA   97

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget