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BaseInfo

ncRNA ID novel_zma_miR9824
Species Zea mays
Class miRNA
Genome position Chr5:166022333-166022410 [-]
Reference genome RefGen_v4
Source SRR1997865;SRR5451003
Length 24
Mature sequence(if miRNA) 55 - AGUUGGCUCUCGGCAAAGACUGAC - 78
Stem-loop(if miRNA) ----  U               ACUGACG G       U  GG
    AG UGGCUCUCGGCAAAG       G CGUCAGC GG  G
    || |||||||||||||||       | ||||||| ||  A
    UC ACCGAGAGCCGUUUC       C GCAGUCG CC  U
CGUU  C               ------G G       -  GG
Stem-loop sequence AGUUGGCUCUCGGCAAAGACUGACGGGCGUCAGCUGGGGGAUGGCCGCUGACGGCGCUUUGCCGAGAGCCACCUUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT063684.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds NA coding protein psRNATarget
NM_001175015.1
ncRNA:24   CAGUCAGAAACGGCUCUCGGUUGA   1
  |||||||||||||||||||||||*
targets:1246   GUCAGUCUUUGCCGAGAGCCAACG   1269

1.0 Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA NA coding protein psRNATarget