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BaseInfo

ncRNA ID	novel_zma_miR9820
Species	Zea mays
Class	miRNA
Genome position	Chr6:153686084-153686171 [+]
Reference genome	RefGen_v4
Source	SRR4237226
Length	24
Mature sequence(if miRNA)	65 - AAGACACUCGACAAAGAAACUCUU - 88
Stem-loop(if miRNA)	--     -              GUAUUUG              GA   GAGUU CUUUGUCGAGUGUU       UGACACUCGGCAAA  G   ||||| ||||||||||||||       ||||||||||||||   CUCAA GAAACAGCUCACAG       ACUGUGAGCCGUUU  C UU     A              -AAAAAA              AC
Stem-loop sequence	GAGUUCUUUGUCGAGUGUUGUAUUUGUGACACUCGGCAAAGAGCCAUUUGCCGAGUGUCAAAAAAAGACACUCGACAAAGAAACUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT055423.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAGAA   1   ||*||||||||||||||||||=|| targets:81   AAAAGUUUCUUUGUCGAGUGUUUU   104 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAGAA   1   ||*||||||||||||||||||=|| targets:81   AAAAGUUUCUUUGUCGAGUGUUUU   104 Target Full Sequence	1.5	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAGAA   1   ||*||||||||||||||||||=|| targets:2100   AAAAGUUUCUUUGUCGAGUGUUUU   2123 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   UUCUCAAAGAAACAGCUCACAGAA   1   ||*||||||||||||||||||=|| targets:2100   AAAAGUUUCUUUGUCGAGUGUUUU   2123 Target Full Sequence	1.5	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
EU957132.1	ncRNA:24   UUCUCAAA-GAAACAGCUCACAGAA   1   *|*|*|||-|||||||||||||||* targets:1447   UACAAUUUACUUUGUCGAGUGUCUC   1471 Target Full Sequence	3.0	Zea mays clone 1583769 mRNA sequence	NA	coding protein	psRNATarget