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BaseInfo

ncRNA ID	osa-miRf10579-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UAGUCCCGGUUUGUAACACC - NA
Stem-loop(if miRNA)	C             AAU      UA  -    -GU     CCC CCGGUUGGUGUUAC AACCGGGAUUAAA   GAUUUU  GU CCUG   UGGUU   U |||||||||||||| |||||||||||||   ||||||  || ||||   ||||| GGCCAACCACAAUG UUGGCCCUGAUUU   CUAGGA  CG GGAC   GCCGG   G               U             ---      UC  C    UGU     ACU
Stem-loop sequence	CCGGUUGGUGUUACCAACCGGGAUUAAAAAUGAUUUUUAGUCCUGGUUGGUUCCCUGUCAGGCCGUGUCAGGCGCCUAGGAUCUUUAGUCCCGGUUUGUAACACCAACCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015755256.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   ||||||||*||||||||||| targets:68   GGUGUUACCAACCGGGACUA   87 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346665 (LOC4346665), transcript variant X2, mRNA	uncharacterized LOC4346665(LOC4346665)	coding protein	psRNATarget
AK288405.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   ||||||||*||||||||||| targets:2405   GGUGUUACCAACCGGGACUA   2424 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   *|||||||*||||||||||| targets:923   UGUGUUACCAACCGGGACUA   942 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
AK288424.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   *|||||||*||||||||||| targets:2398   AGUGUUACCAACCGGGACUA   2417 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
JB164979.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   ||||*|||*||||||||||| targets:60   GGUGCUACCAACCGGGACUA   79 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
HI404518.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   ||||*|||*||||||||||| targets:60   GGUGCUACCAACCGGGACUA   79 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   ||||*|||*||||||||||| targets:60   GGUGCUACCAACCGGGACUA   79 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
AK289098.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   |||*||||*||||||||||| targets:121   GGUUUUACCAACCGGGACUA   140 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   **||||||*||||||||||| targets:461   UAUGUUACCAACCGGGACUA   480 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK288496.1	ncRNA:20   CCACAAUGUUUGGCCCUGAU   1   **||||||*||||||||||| targets:659   ACUGUUACUAACCGGGACUA   678 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090040O05, full insert sequence	NA	coding protein	psRNATarget