Search result

BaseInfo

ncRNA ID	osa-miRf10578-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CAUCUCUACUCUGCAGCCGC - NA
Stem-loop(if miRNA)	C           CC  UGC   -     UCAUCC      C UCGGCAUCUCUACU UGCAGCCGCUG  UC   CGC CUCUU      GCUGUC G |||||||||||||| |||||||||||  ||   ||| |||||      |||||| U AGCCGUAGAGAUGA GCGUCGGCGAC  AG   GUG GAGAA      CGGCAG G               A           --  -UU   A     ------      C
Stem-loop sequence	UCGGCAUCUCUACUCUGCAGCCGCUGCCUCUGCCGCCUCUUUCAUCCGCUGUCCGUGCGACGGCAAGAGAGUGUUGACAGCGGCUGCGAAGUAGAGAUGCCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015757296.1	ncRNA:20   CGCCGACGUCUCAUCUCUAC   1   ||||||||||*||||||||| targets:71   GCGGCUGCAGCGUAGAGAUG   90 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group receptor-interacting serine/threonine-protein kinase 4 (LOC4349522), mRNA	receptor-interacting serine/threonine-protein kinase 4(LOC4349522)	coding protein	psRNATarget
AB110173.1	ncRNA:20   CGCCGACGUCUCAUCUCUAC   1   ||||||||||*||||||||| targets:55   GCGGCUGCAGCGUAGAGAUG   74 Target Full Sequence	1.5	Oryza sativa Japonica Group mRNA for ankyrin, complete cds, clone: 13YPB030	NA	coding protein	psRNATarget
AK071604.1	ncRNA:20   CGCCGACGUCUCAUCUCUAC   1   ||||||||||*||||||||| targets:42   GCGGCUGCAGCGUAGAGAUG   61 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023099C19, full insert sequence	NA	coding protein	psRNATarget