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BaseInfo

ncRNA ID novel_zma_miR9803
Species Zea mays
Class miRNA
Genome position Chr5:102776524-102776625 [-]
Reference genome RefGen_v4
Source SRR4237226
Length 24
Mature sequence(if miRNA) 1 - AACCGUCGAACUUAACUCAUUAGG - 24
Stem-loop(if miRNA) -UAU             -    --GUGCA  UAAAAACGUGGGUACCCACGU
    AUGAGUUAAGUUC AUGG       GU                     U
    ||||||||||||| ||||       ||
    UACUCAAUUCAAG UGCC       AC                     C
GGAU             C    AAAACCA  CCUGGGUGCUUGAAUCAAAUU
Stem-loop sequence UAUAUGAGUUAAGUUCAUGGGUGCAGUUAAAAACGUGGGUACCCACGUUCUUAAACUAAGUUCGUGGGUCCCAACCAAAACCGUCGAACUUAACUCAUUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008666676.2
ncRNA:24   GGAUUACUCAAUUCAAGCUGCCAA   1
  ||||||*=||||||||||||||||
targets:713   CCUAAUAGGUUAAGUUCGACGGUU   736

2.0 PREDICTED: Zea mays uncharacterized LOC103643487 (LOC103643487), mRNA NA coding protein psRNATarget
BT055929.2
ncRNA:24   GGAUUACUCAAUUCAAGCUGCCAA   1
  ||||||*=||||||||||||||||
targets:1956   CCUAAUAGGUUAAGUUCGACGGUU   1979

2.0 Zea mays full-length cDNA clone ZM_BFc0045N06 mRNA, complete cds NA coding protein psRNATarget
BT066569.2
ncRNA:24   GGAUUACUCAAUUCAAGCUGCCAA   1
  ||||||*=||||||||||||||||
targets:1972   CCUAAUAGGUUAAGUUCGACGGUU   1995

2.0 Zea mays full-length cDNA clone ZM_BFb0031A06 mRNA, complete cds NA coding protein psRNATarget