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BaseInfo

ncRNA ID novel_zma_miR9797
Species Zea mays
Class miRNA
Genome position Chr4:22023508-22023595 [-]
Reference genome RefGen_v4
Source SRR4237226
Length 21
Mature sequence(if miRNA) 1 - CUUGACAAGUUCAAGGGCCAC - 21
Stem-loop(if miRNA) --C                       CCA    UGACAUUUUCA
   GCCCUUGAACUUGUCGAGGGAUG   GAAA           A
   |||||||||||||||||||||||   ||||           A
   CGGGAACUUGAACAGUUCCCUAC   UGAA           C
CAC                       -AG    UCCAGGUGUUU
Stem-loop sequence CGCCCUUGAACUUGUCGAGGGAUGCCAGAAAUGACAUUUUCAAACUUUGUGGACCUAAGUGACAUCCCUUGACAAGUUCAAGGGCCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001150240.1
ncRNA:21   CACCGGGAACUUGAACAGUUC   1
  ||*||||*||||||||||||*
targets:64   GUAGCCCCUGAACUUGUCAAU   84

3.0 Zea mays hypothetical protein (LOC100276452), mRNA NA coding protein psRNATarget
EU962359.1
ncRNA:21   CACCGGGAACUUGAACAGUUC   1
  ||*||||*||||||||||||*
targets:64   GUAGCCCCUGAACUUGUCAAU   84

3.0 Zea mays clone 242021 hypothetical protein mRNA, complete cds NA coding protein psRNATarget