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BaseInfo

ncRNA ID osa-miRf10576-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - CUUGUCCUGCGGGAGCUGCUGGUU - NA
Stem-loop(if miRNA)    -CA    -     C   -          --   A   G    -A   C
GCC   CUUG UCCUG GGG AGCUGCUGGU  UCC GGC UGCC  CGA A
|||   |||| ||||| ||| ||||||||||  ||| ||| ||||  ||| C
CGG   GAAC GGGGC CCC UUGAUGACCA  AGG CCG ACGG  GCU G
   UAA    C     A   G          CC   -   A    CA   U
Stem-loop sequence GCCCACUUGUCCUGCGGGAGCUGCUGGUUCCAGGCGUGCCACGACACGUUCGACGGCAAGCCGGACCACCAGUAGUUGCCCACGGGGCCAAGAAUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015781289.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  ||||||||||||||||||||||||
targets:734   AACCAGCAGCUCCCGCAGGACAAG   757

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335776 (LOC4335776), mRNA uncharacterized LOC4335776(Os04g0411651) coding protein psRNATarget
AK102032.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  ||||||||||||||||||||||||
targets:588   AACCAGCAGCUCCCGCAGGACAAG   611

0.0 Oryza sativa Japonica Group cDNA clone:J033081A11, full insert sequence NA coding protein psRNATarget
XM_015778382.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  ||||||||||||||||||||=|||
targets:728   AACCAGCAGCUCCCGCAGGAUAAG   751

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335777 (LOC4335777), mRNA uncharacterized LOC4335777(LOC4335777) coding protein psRNATarget
AK243544.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  ||||||||||||||||||||=|||
targets:689   AACCAGCAGCUCCCGCAGGAUAAG   712

1.5 Oryza sativa Japonica Group cDNA, clone: J100078M24, full insert sequence NA coding protein psRNATarget
XM_015767282.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  *||**||||||||||||||||*||
targets:866   UACGUGCAGCUCCCGCAGGACCAG   889

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329550 (LOC4329550), mRNA uncharacterized LOC4329550(Os02g0532401) coding protein psRNATarget
AK061527.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  *||**||||||||||||||||*||
targets:757   UACGUGCAGCUCCCGCAGGACCAG   780

1.5 Oryza sativa Japonica Group cDNA clone:006-310-D10, full insert sequence NA coding protein psRNATarget
AK119210.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  *||**||||||||||||||||*||
targets:757   UACGUGCAGCUCCCGCAGGACCAG   780

1.5 Oryza sativa Japonica Group cDNA clone:001-041-E04, full insert sequence NA coding protein psRNATarget
CT833180.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  *||**||||||||||||||||*||
targets:756   UACGUGCAGCUCCCGCAGGACCAG   779

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA028L11, full insert sequence NA coding protein psRNATarget
AK104452.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  *||**||||||||||||||||*||
targets:757   UACGUGCAGCUCCCGCAGGACCAG   780

1.5 Oryza sativa Japonica Group cDNA clone:006-212-H03, full insert sequence NA coding protein psRNATarget
AK099017.1
ncRNA:24   UUGGUCGUCGAGGGCGUCCUGUUC   1
  *||**||||||||||||||||*||
targets:758   UACGUGCAGCUCCCGCAGGACCAG   781

1.5 Oryza sativa Japonica Group cDNA clone:J013119A16, full insert sequence NA coding protein psRNATarget