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BaseInfo

ncRNA ID novel_zma_miR9787
Species Zea mays
Class miRNA
Genome position Chr4:214915678-214915767 [+]
Reference genome RefGen_v4
Source SRR4237226
Length 24
Mature sequence(if miRNA) 67 - GUCCAGCACUCGGUAAAGAGACUC - 90
Stem-loop(if miRNA) -GCCCC              U           AACUU U   UG 
      CUUUGCCGAGUGUU GACACUCGGCA     G CUU  CC
      |||||||||||||| |||||||||||     | |||  |G
      GAAAUGGCUCACGA CUGUGAGCCGU     C GGG  GA
CUCAGA              C           --GUC U   GU 
Stem-loop sequence GCCCCCUUUGCCGAGUGUUUGACACUCGGCAAACUUGUCUUUGCCGAGUGGGGUCCUGUGCCGAGUGUCCAGCACUCGGUAAAGAGACUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658185.2
ncRNA:24   CUCAGAGAAAUGGCUCACGACCUG   1
  |||*=|*|||||||||||=|||||
targets:1671   GAGCUUGUUUACCGAGUGUUGGAC   1694

2.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget