ncRNA ID | novel_zma_miR9780 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:100148208-100148264 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237226 |
Length | 19 |
Mature sequence(if miRNA) | 1 - CGAGAGUAGCGUGUACCCC - 19 |
Stem-loop(if miRNA) |
--        GC    A    --     A   CGAGAGUA  GUGU CCCC  CUAGC A   ||||||||  |||| ||||  ||||| G   GCUCUCGU  CAUA GGGG  GGUCG A GG        GU    A    UC     G |
Stem-loop sequence | CGAGAGUAGCGUGUACCCCCUAGCAAGAGGCUGGCUGGGGAAUACUGUGCUCUCGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ102997.1 |
|
2.5 | TSA: Zea mays contig38653, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU943317.1 |
|
2.0 | Zea mays clone 1597341 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT085110.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0291A01 mRNA, complete cds | NA | coding protein | psRNATarget |