ncRNA ID | novel_zma_miR9778 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:211331298-211331377 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997865 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGCUGGCAGUGGCGGCUGGGAACU - 24 |
Stem-loop(if miRNA) |
--        -G         GGA   G GA   GG    U   GGCUGGCA  UGGCGGCUG   ACU G  ACU  GAUU G   ||||||||  |||||||||   ||| |  |||  ||||   UUGGCUGU  GCCGUCGGC   UGG U  UGG  UUAA G GA        GA         -GG   G GG   GA    G |
Stem-loop sequence | GGCUGGCAGUGGCGGCUGGGAACUGGGAACUGGGAUUUGGGAAUUAGGGUGGUGGGUGGCGGCUGCCGAGUGUCGGUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008676885.2 |
|
3.0 | PREDICTED: Zea mays Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 (LOC103651267), transcript variant X2, mRNA | NA | coding protein | psRNATarget |