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BaseInfo

ncRNA ID novel_zma_miR9772
Species Zea mays
Class miRNA
Genome position Chr3:117661550-117661624 [-]
Reference genome RefGen_v4
Source SRR4237226
Length 24
Mature sequence(if miRNA) 52 - AACCGACGGGAAUAAGCUCUAAAC - 75
Stem-loop(if miRNA) --A            A    C  A            U
   ACCGACGGGAAU AGCU UA ACCGACGAGAAU A
   |||||||||||| |||| || |||||||||||| C
   UGGCUGCCCUUA UUGG AU UGGCUGCUCUUA U
UCC            A    U  A            A
Stem-loop sequence AACCGACGGGAAUAAGCUCUAAACCGACGAGAAUUACUAAUUCUCGUCGGUAUAUGGUUAAUUCCCGUCGGUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ240820.1
ncRNA:24   CAAAUCUCGAAUAAGGGCAGCCAA   1
  ||||||=|=|||||||||||||||
targets:63   GUUUAGGGUUUAUUCCCGUCGGUU   86

2.0 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget
HI408690.1
ncRNA:24   CAAAUCUCGAAUAAGGGCAGCCAA   1
  ||||||=|=|||||||||||||||
targets:63   GUUUAGGGUUUAUUCCCGUCGGUU   86

2.0 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget
JB169151.1
ncRNA:24   CAAAUCUCGAAUAAGGGCAGCCAA   1
  ||||||=|=|||||||||||||||
targets:63   GUUUAGGGUUUAUUCCCGUCGGUU   86

2.0 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget