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BaseInfo

ncRNA ID novel_zma_miR9771
Species Zea mays
Class miRNA
Genome position Chr3:130912887-130912981 [-]
Reference genome RefGen_v4
Source SRR4237226
Length 24
Mature sequence(if miRNA) 72 - AUUUAAUAUAAGAACAUGGGUACC - 95
Stem-loop(if miRNA) --AU     A       A        CAA        AUUAACCCAC
    UUAAU UAAGAAC UGGGUACC   GUUCUUAA          G
    ||||| ||||||| ||||||||   ||||||||          A
    AAUUA AUUCUUG ACCCAUGG   CAAGAAUU          A
ACCC     A       C        CUA        AACUCAAUAC
Stem-loop sequence AUUUAAUAUAAGAACAUGGGUACCCAAGUUCUUAAAUUAACCCACGAACAUAACUCAAUUAAGAACAUCGGUACCCACGUUCUUAAAUUAACCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163877.1
ncRNA:24   CCAUGGGUACAAGAAUAUAAUUUA   1
  ||||||||*|||||||||||||||
targets:62   GGUACCCACGUUCUUAUAUUAAAU   85

1.0 Sequence 1541 from Patent EP2559767 NA coding protein psRNATarget
LQ235546.1
ncRNA:24   CCAUGGGUACAAGAAUAUAAUUUA   1
  ||||||||*|||||||||||||||
targets:62   GGUACCCACGUUCUUAUAUUAAAU   85

1.0 Sequence 1541 from Patent EP2985353 NA coding protein psRNATarget
HI403416.1
ncRNA:24   CCAUGGGUACAAGAAUAUAAUUUA   1
  ||||||||*|||||||||||||||
targets:62   GGUACCCACGUUCUUAUAUUAAAU   85

1.0 Sequence 1541 from Patent EP2074227 NA coding protein psRNATarget