Search result

BaseInfo

ncRNA ID	novel_zma_miR9769
Species	Zea mays
Class	miRNA
Genome position	Chr3:141629257-141629317 [-]
Reference genome	RefGen_v4
Source	SRR4237226
Length	23
Mature sequence(if miRNA)	39 - AUAAAUCGCUAAAUAUAGAAACU - 61
Stem-loop(if miRNA)	--AU    CG                         AAAU  CUAAAUAUAGAAACUAAAAUA     ||||  ||||||||||||||||||||A     UUUA  GGUUUAUAUCUUUGAUUUUGA AGGU    AU
Stem-loop sequence	AUAAAUCGCUAAAUAUAGAAACUAAAAUAAAGUUUUAGUUUCUAUAUUUGGUAAUUUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163854.1	ncRNA:23   UCAAAGAUAUAAAUCGCUAAAUA   1   |||||||=||||||||*|||||| targets:60   AGUUUCUGUAUUUAGCAAUUUAU   82 Target Full Sequence	2.5	Sequence 1518 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235523.1	ncRNA:23   UCAAAGAUAUAAAUCGCUAAAUA   1   |||||||=||||||||*|||||| targets:60   AGUUUCUGUAUUUAGCAAUUUAU   82 Target Full Sequence	2.5	Sequence 1518 from Patent EP2985353	NA	coding protein	psRNATarget
HI403393.1	ncRNA:23   UCAAAGAUAUAAAUCGCUAAAUA   1   |||||||=||||||||*|||||| targets:60   AGUUUCUGUAUUUAGCAAUUUAU   82 Target Full Sequence	2.5	Sequence 1518 from Patent EP2074227	NA	coding protein	psRNATarget
EU940879.1	ncRNA:23   UCAAAGAUAUAAAUCGCUAAAUA   1   |||*|||*|||||||*||||||| targets:2958   AGUGUCUCUAUUUAGAGAUUUAU   2980 Target Full Sequence	2.5	Zea mays clone 1165679 mRNA sequence	NA	coding protein	psRNATarget