Search result

BaseInfo

ncRNA ID novel_zma_miR9755
Species Zea mays
Class miRNA
Genome position Chr1:77535697-77535762 [+]
Reference genome RefGen_v4
Source SRR4237226
Length 20
Mature sequence(if miRNA) 1 - AUAGGAAGUUACGUAACUUC - 20
Stem-loop(if miRNA) --A           G         A    UUGG
   UAGGAAGUUAC UAACUUCCU GAGU    U
   ||||||||||| ||||||||| ||||
   AUCCUUCAAUG AUUGAAGGA CUCA    C
GAG           A         A    UUUA
Stem-loop sequence AUAGGAAGUUACGUAACUUCCUAGAGUUUGGUCAUUUACUCAAGGAAGUUAAGUAACUUCCUAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:20   CUUCAAUGCAUUGAAGGAUA   1
  ||||||||*||||||||||*
targets:947   GAAGUUACUUAACUUCCUAG   966

2.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget
EU949881.1
ncRNA:20   CUUCAAUGCAUUGAAGGAUA   1
  *|||||||*||||||||||*
targets:907   CAAGUUACUUAACUUCCUAG   926

2.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget