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BaseInfo

ncRNA ID	novel_zma_miR9749
Species	Zea mays
Class	miRNA
Genome position	Chr1:150616960-150617009 [-]
Reference genome	RefGen_v4
Source	SRR4237226
Length	23
Mature sequence(if miRNA)	1 - UAACACUCGGCAAAGAACUUCUU - 23
Stem-loop(if miRNA)	--    A              CAAA   GAAG UCUUUGCCGAGUGU    A   |||| ||||||||||||||   CUUC AGAAACGGCUCACA    A UU    A              AUAU
Stem-loop sequence	GAAGAUCUUUGCCGAGUGUCAAAAAUAUAACACUCGGCAAAGAACUUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238823.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ||||||*|||||||||||||||| targets:22   AAGAAGCUCUUUGCCGAGUGUUA   44 Target Full Sequence	1.0	Sequence 4818 from Patent EP2985353	NA	coding protein	psRNATarget
JB167154.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ||||||*|||||||||||||||| targets:22   AAGAAGCUCUUUGCCGAGUGUUA   44 Target Full Sequence	1.0	Sequence 4818 from Patent EP2559767	NA	coding protein	psRNATarget
HI406693.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ||||||*|||||||||||||||| targets:22   AAGAAGCUCUUUGCCGAGUGUUA   44 Target Full Sequence	1.0	Sequence 4818 from Patent EP2074227	NA	coding protein	psRNATarget
HI408565.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ***|=|||||||||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGUUA   23 Target Full Sequence	1.0	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget
JB169026.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ***|=|||||||||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGUUA   23 Target Full Sequence	1.0	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ***|=|||||||||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGUUA   23 Target Full Sequence	1.0	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008672265.2	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ||*||||||||||=||||||||* targets:429   AAAAAGUUCUUUGUCGAGUGUUU   451 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008672266.2	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   ||*||||||||||=||||||||* targets:681   AAAAAGUUCUUUGUCGAGUGUUU   703 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X2, mRNA	NA	coding protein	psRNATarget
JB170246.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   =*||=|||||||||||||||*|| targets:76   GUGAGGUUCUUUGCCGAGUGCUA   98 Target Full Sequence	2.5	Sequence 7910 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241915.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   =*||=|||||||||||||||*|| targets:76   GUGAGGUUCUUUGCCGAGUGCUA   98 Target Full Sequence	2.5	Sequence 7910 from Patent EP2985353	NA	coding protein	psRNATarget
HI409785.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   =*||=|||||||||||||||*|| targets:76   GUGAGGUUCUUUGCCGAGUGCUA   98 Target Full Sequence	2.5	Sequence 7910 from Patent EP2074227	NA	coding protein	psRNATarget
JB167423.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   *|*|=||||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAA   199 Target Full Sequence	2.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   *|*|=||||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAA   199 Target Full Sequence	2.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
HI406962.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   *|*|=||||||||||||||||*| targets:177   UAUAGGUUCUUUGCCGAGUGUAA   199 Target Full Sequence	2.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238815.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   *|*|=||||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAA   62 Target Full Sequence	2.5	Sequence 4810 from Patent EP2985353	NA	coding protein	psRNATarget
HI406685.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   *|*|=||||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAA   62 Target Full Sequence	2.5	Sequence 4810 from Patent EP2074227	NA	coding protein	psRNATarget
JB167146.1	ncRNA:23   UUCUUCAAGAAACGGCUCACAAU   1   *|*|=||||||||||||||||*| targets:40   UAUAGGUUCUUUGCCGAGUGUAA   62 Target Full Sequence	2.5	Sequence 4810 from Patent EP2559767	NA	coding protein	psRNATarget