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BaseInfo

ncRNA ID novel_zma_miR9731
Species Zea mays
Class miRNA
Genome position Chr9:98166336-98166389 [-]
Reference genome RefGen_v4
Source SRR4237226
Length 24
Mature sequence(if miRNA) 1 - GGCCUCAGACGAGUCAUGAUUGUG - 24
Stem-loop(if miRNA) --G          G     CCU   UG
   AGUCGUGACU CGUCU   GCC  A
   |||||||||| |||||   |||  G
   UUAGUACUGA GCAGA   CGG  C
GUG          -     CUC   UU
Stem-loop sequence GAGUCGUGACUGCGUCUCCUGCCUGAGCUUGGCCUCAGACGAGUCAUGAUUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001348352.1
ncRNA:24   GUGUUAGUACUGAGCAGACUCCGG   1
  |=||=|||||=|||||||||||||
targets:795   CGCAGUCAUGGCUCGUCUGAGGCC   818

1.0 Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA NA coding protein psRNATarget
NM_001348352.1
ncRNA:24   GUGUUAGUACUGAGCAGACUCCGG   1
  |=||=|||*|=|||||||||||||
targets:236   CGCAGUCACGGCUCGUCUGAGGCC   259

2.0 Zea mays uncharacterized LOC100303785 (LOC100303785), mRNA NA coding protein psRNATarget