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BaseInfo

ncRNA ID novel_zma_miR9726
Species Zea mays
Class miRNA
Genome position Chr8:147724564-147724641 [+]
Reference genome RefGen_v4
Source SRR4237226
Length 21
Mature sequence(if miRNA) 58 - UAUUUGUAGUUCCAAAGUGAU - 78
Stem-loop(if miRNA) --       AG                         CCC
  CACUUUG  AUUACAAAUAAGCUGAAAUAAGCUA   A
  |||||||  |||||||||||||||||||||||||
  GUGAAAC  UGAUGUUUAUUCGACUUUAUUCGAU   A
UA       CU                         CAU
Stem-loop sequence CACUUUGAGAUUACAAAUAAGCUGAAAUAAGCUACCCAAUACUAGCUUAUUUCAGCUUAUUUGUAGUUCCAAAGUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020551678.1
ncRNA:21   UAGUGAAACCUUGAUGUUUAU   1
  ||||=||||||||*|||||||
targets:612   AUCAUUUUGGAACCACAAAUA   632

2.5 PREDICTED: Zea mays RNA recognition motif containing protein (LOC100282725), transcript variant X1, mRNA NA coding protein psRNATarget