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BaseInfo

ncRNA ID novel_zma_miR9723
Species Zea mays
Class miRNA
Genome position Chr8:10367687-10367771 [+]
Reference genome RefGen_v4
Source SRR4237226
Length 24
Mature sequence(if miRNA) 62 - AACCCCCUGACGCAGCACCGUUGG - 85
Stem-loop(if miRNA) --                   A     U         ACAGAG
  AACGGUGUUGUGUCAGGGG GUUUU GUAAAAUGU      U
  ||||||||||||||||||| ||||| |||||||||      U
  UUGCCACGACGCAGUCCCC CAAAA UAUUUUAUA      G
GG                   -     -         AAAAAC
Stem-loop sequence AACGGUGUUGUGUCAGGGGAGUUUUUGUAAAAUGUACAGAGUUGCAAAAAAUAUUUUAUAAAACCCCCUGACGCAGCACCGUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008660409.2
ncRNA:24   GGUUGCCACGACGCAGUCCCCC-AA   1
  ||||||||||||||||||||||-||
targets:1280   CCAACGGUGCUGCGUCAGGGGGGUU   1304

3.0 PREDICTED: Zea mays homeodomain-leucine zipper transcription factor TaHDZipI-1 (LOC100282963), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020539811.1
ncRNA:24   GGUUGCCACGACGCAGUCCCCC-AA   1
  ||||||||||||||||||||||-||
targets:1562   CCAACGGUGCUGCGUCAGGGGGGUU   1586

3.0 PREDICTED: Zea mays anthocyanidin 3-O-glucoside 6''-O-acyltransferase (LOC103631128), mRNA NA coding protein psRNATarget
XM_008681149.2
ncRNA:24   GGUUGCCACGACGCAGUCCCCCAA   1
  |||||||||||||||||||||*||
targets:604   CCAACGGUGCUGCGUCAGGGGUUU   627

1.5 PREDICTED: Zea mays mini zinc finger protein 1 (LOC103654311), mRNA NA coding protein psRNATarget