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BaseInfo

ncRNA ID	novel_zma_miR9703
Species	Zea mays
Class	miRNA
Genome position	Chr1:195963586-195963627 [+]
Reference genome	RefGen_v4
Source	SRR4237226
Length	20
Mature sequence(if miRNA)	1 - GAAUCCCCUAGCUAUUCAAA - 20
Stem-loop(if miRNA)	--     C   A        A   GAAUC CCU GCUAUUCA A   ||||| ||| ||||||||   CUUAG GGA CGAUAAGU A UC     A   G        U
Stem-loop sequence	GAAUCCCCUAGCUAUUCAAAAUUGAAUAGCGAGGAGAUUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406192.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:31   AUUGAAUAGCAAGGGGAUUC   50 Target Full Sequence	1.5	Sequence 4317 from Patent EP2074227	NA	coding protein	psRNATarget
JB166631.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:31   AUUGAAUAGCAAGGGGAUUC   50 Target Full Sequence	1.5	Sequence 4295 from Patent EP2559767	NA	coding protein	psRNATarget
JB166653.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:31   AUUGAAUAGCAAGGGGAUUC   50 Target Full Sequence	1.5	Sequence 4317 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238300.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:31   AUUGAAUAGCAAGGGGAUUC   50 Target Full Sequence	1.5	Sequence 4295 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238322.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:31   AUUGAAUAGCAAGGGGAUUC   50 Target Full Sequence	1.5	Sequence 4317 from Patent EP2985353	NA	coding protein	psRNATarget
HI406170.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:31   AUUGAAUAGCAAGGGGAUUC   50 Target Full Sequence	1.5	Sequence 4295 from Patent EP2074227	NA	coding protein	psRNATarget
JB167194.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:52   AUUGAAUAGCAAGGGGAUUC   71 Target Full Sequence	1.5	Sequence 4858 from Patent EP2559767	NA	coding protein	psRNATarget
HI406733.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:52   AUUGAAUAGCAAGGGGAUUC   71 Target Full Sequence	1.5	Sequence 4858 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238863.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:52   AUUGAAUAGCAAGGGGAUUC   71 Target Full Sequence	1.5	Sequence 4858 from Patent EP2985353	NA	coding protein	psRNATarget
EU948260.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:383   AUUGAAUAGCAAGGGGAUUC   402 Target Full Sequence	1.5	Zea mays clone 371984 mRNA sequence	NA	coding protein	psRNATarget
BT018215.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:1510   AUUGAAUAGCGAGGGGAUUC   1529 Target Full Sequence	1.5	Zea mays clone EL01N0561A07.c mRNA sequence	NA	coding protein	psRNATarget
XM_008648135.2	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:1467   AUUGAAUAGCGAGGGGAUUC   1486 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103627823 (LOC103627823), mRNA	NA	coding protein	psRNATarget
XM_008667073.2	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:3350   AUUGAAUAGCAAGGGGAUUC   3369 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008667075.2	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:3366   AUUGAAUAGCAAGGGGAUUC   3385 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008667074.2	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||||||||*||||||||| targets:3370   AUUGAAUAGCAAGGGGAUUC   3389 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI403328.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   **||||||||*||||||||| targets:43   GGUGAAUAGCAAGGGGAUUC   62 Target Full Sequence	2.5	Sequence 1453 from Patent EP2074227	NA	coding protein	psRNATarget
JB163789.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   **||||||||*||||||||| targets:43   GGUGAAUAGCAAGGGGAUUC   62 Target Full Sequence	2.5	Sequence 1453 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235458.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   **||||||||*||||||||| targets:43   GGUGAAUAGCAAGGGGAUUC   62 Target Full Sequence	2.5	Sequence 1453 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238782.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   **||||||||*||||||||| targets:40   GGUGAAUAGCAAGGGGAUUC   59 Target Full Sequence	2.5	Sequence 4777 from Patent EP2985353	NA	coding protein	psRNATarget
JB167113.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   **||||||||*||||||||| targets:40   GGUGAAUAGCAAGGGGAUUC   59 Target Full Sequence	2.5	Sequence 4777 from Patent EP2559767	NA	coding protein	psRNATarget
HI406652.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   **||||||||*||||||||| targets:40   GGUGAAUAGCAAGGGGAUUC   59 Target Full Sequence	2.5	Sequence 4777 from Patent EP2074227	NA	coding protein	psRNATarget
EU951239.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   **||||||||*||||||||| targets:199   GGUGAAUAGCAAGGGGAUUC   218 Target Full Sequence	2.5	Zea mays clone 689476 mRNA sequence	NA	coding protein	psRNATarget
AF244696.1	ncRNA:20   AAACUUAUCGAUCCCCUAAG   1   *|||*|||||*||||||||| targets:820   AUUGCAUAGCAAGGGGAUUC   839 Target Full Sequence	2.5	Zea mays glutathione S-transferase GST 31 mRNA, complete cds	NA	coding protein	psRNATarget