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BaseInfo

ncRNA ID novel_zma_miR9701
Species Zea mays
Class miRNA
Genome position Chr5:14201383-14201487 [+]
Reference genome RefGen_v4
Source SRR1997865;SRR5451005
Length 24
Mature sequence(if miRNA) 82 - GUCUGUGGCACUCGGCAAAGAGGC - 105
Stem-loop(if miRNA) ---C               -    C  A                 AAG   U G
    CUUUGUCGAGUGUCA AGAC AU GCACUCGGCAAAGAACC   ACC G G
    ||||||||||||||| |||| || |||||||||||||||||   ||| |
    GAAACGGCUCACGGU UCUG UA UGUGAGCCGUUUCUUGG   UGG C C
CGGA               G    -  A                 AUA   C A
Stem-loop sequence CCUUUGUCGAGUGUCAAGACCAUAGCACUCGGCAAAGAACCAAGACCUGGGCACCGGUAUAGGUUCUUUGCCGAGUGUAAUGUCUGUGGCACUCGGCAAAGAGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238769.1
ncRNA:24   CGGAGAAACGGCUCACGGUGUCUG   1
  ||=||||||||||||||||=||||
targets:167   GCUUCUUUGCCGAGUGCCAUAGAC   190

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   CGGAGAAACGGCUCACGGUGUCUG   1
  ||=||||||||||||||||=||||
targets:167   GCUUCUUUGCCGAGUGCCAUAGAC   190

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   CGGAGAAACGGCUCACGGUGUCUG   1
  ||=||||||||||||||||=||||
targets:167   GCUUCUUUGCCGAGUGCCAUAGAC   190

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget