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BaseInfo

ncRNA ID novel_zma_miR9692
Species Zea mays
Class miRNA
Genome position Chr10:24999744-24999970 [-]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - AUGAUAUCAUGACACGUAGACAAG - 24
Stem-loop(if miRNA) --    C                     AC               UUUUACAAUG   G      GU     GA A A       G            A     CA      CA
  UGUC ACGUGUUAUGAUAUCAUAUGU  AGGCUGUGAUAAAAA          UUU GAGAAA  UGUGA  C C AUGUGUA AAACCUAAGAGA CUACA  UGAAAU  U
  |||| |||||||||||||||||||||  |||||||||||||||          ||| ||||||  |||||  | | ||||||| |||||||||||| |||||  ||||||
  ACAG UGCACAGUACUAUAGUAUACA  UCCGACACUAUUUUU          AAA CUCUUU  AUACU  G G UACACAU UUUGGAUUCUCU GGUGU  ACUUUG  A
GA    A                     AU               UAACUUUUUA   G      UG     GC C A       G            A     -A      AG
Stem-loop sequence UGUCCACGUGUUAUGAUAUCAUAUGUACAGGCUGUGAUAAAAAUUUUACAAUGUUUGGAGAAAGUUGUGAGACACAAUGUGUAGAAACCUAAGAGAACUACACAUGAAAUCAUAGAGUUUCAAUGUGGAUCUCUUAGGUUUGUACACAUAGCGCGUCAUAGUUUUCUCGAAAAUUUUUCAAUUUUUUAUCACAGCCUUAACAUAUGAUAUCAUGACACGUAGACAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235350.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  ||||||*|||||||||||||||||
targets:7   CUUGUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1345 from Patent EP2985353 NA coding protein psRNATarget
JB163681.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  ||||||*|||||||||||||||||
targets:7   CUUGUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1345 from Patent EP2559767 NA coding protein psRNATarget
HI403220.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  ||||||*|||||||||||||||||
targets:7   CUUGUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1345 from Patent EP2074227 NA coding protein psRNATarget
HI403209.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  =|||||*|||||||||||||||||
targets:7   UUUGUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget
LQ235339.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  =|||||*|||||||||||||||||
targets:7   UUUGUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
JB163670.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  =|||||*|||||||||||||||||
targets:7   UUUGUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget
HI403222.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  |||*||*|||||||||||||||||
targets:7   CUUCUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1347 from Patent EP2074227 NA coding protein psRNATarget
JB163683.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  |||*||*|||||||||||||||||
targets:7   CUUCUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1347 from Patent EP2559767 NA coding protein psRNATarget
LQ235352.1
ncRNA:24   GAACAGAUGCACAGUACUAUAGUA   1
  |||*||*|||||||||||||||||
targets:7   CUUCUCCACGUGUCAUGAUAUCAU   30

1.0 Sequence 1347 from Patent EP2985353 NA coding protein psRNATarget