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BaseInfo

ncRNA ID	novel_zma_miR9691
Species	Zea mays
Class	miRNA
Genome position	Chr6:82836915-82837006 [+]
Reference genome	RefGen_v4
Source	SRR4237225
Length	24
Mature sequence(if miRNA)	69 - AAGGAACCGCUUGUAGAAAUACGA - 92
Stem-loop(if miRNA)	---G         U   A        U      A CAC             AUUUCUACA GCG UUCUUUAA AAAACC C   UAGAAAUCA     ||||||||| ||| |||||||| |||||| |   ||||||||U     UAAAGAUGU CGC AAGGAAUU UUUUGG G   AUUUUUAGG AGCA         U   C        C      C UAC
Stem-loop sequence	GAUUUCUACAUGCGAUUCUUUAAUAAAACCACCACUAGAAAUCAUGGAUUUUUACAUGCGGUUUUCUUAAGGAACCGCUUGUAGAAAUACGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235114.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   ||*||||||||||=|||||||||| targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	1.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget
HI402984.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   ||*||||||||||=|||||||||| targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	1.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
JB163445.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   ||*||||||||||=|||||||||| targets:32   UCAUAUUUCUACAGGCGGUUCCUU   55 Target Full Sequence	1.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
JB167563.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   |||-|||||||||*|||||||||| targets:9   UCG-AUUUCUACAUGCGGUUCCUU   31 Target Full Sequence	1.5	Sequence 5227 from Patent EP2559767	NA	coding protein	psRNATarget
HI407102.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   |||-|||||||||*|||||||||| targets:9   UCG-AUUUCUACAUGCGGUUCCUU   31 Target Full Sequence	1.5	Sequence 5227 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239232.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   |||-|||||||||*|||||||||| targets:9   UCG-AUUUCUACAUGCGGUUCCUU   31 Target Full Sequence	1.5	Sequence 5227 from Patent EP2985353	NA	coding protein	psRNATarget
HI403097.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   |=|-|||||||||*|||||||||| targets:50   UUG-AUUUCUACAUGCGGUUCCUU   72 Target Full Sequence	1.5	Sequence 1222 from Patent EP2074227	NA	coding protein	psRNATarget
JB163558.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   |=|-|||||||||*|||||||||| targets:50   UUG-AUUUCUACAUGCGGUUCCUU   72 Target Full Sequence	1.5	Sequence 1222 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235227.1	ncRNA:24   AGCAUAAAGAUGUUCGCCAAGGAA   1   |=|-|||||||||*|||||||||| targets:50   UUG-AUUUCUACAUGCGGUUCCUU   72 Target Full Sequence	1.5	Sequence 1222 from Patent EP2985353	NA	coding protein	psRNATarget