ncRNA ID | novel_zma_miR9690 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:201201026-201201199 [+] |
Reference genome | RefGen_v4 |
Source | SRR4237225 |
Length | 24 |
Mature sequence(if miRNA) | 151 - AUUAGUCCGCAGAAACCAAACACC - 174 |
Stem-loop(if miRNA) |
--     A      -A A       U      CU  UUAUUU                   C C              CA    CAAAAAU   UGUUU GUUUCU  G GACUAAU UUUAGU  CU      UAUUUUAUUUUAUUUUAGU U UAAAUUAUUAAAUA  GAAA       A   ||||| ||||||  | ||||||| ||||||  ||      ||||||||||||||||||| | ||||||||||||||  ||||   ACAAA CAAAGA  C CUGAUUA AAAUCA  GA      GUAAAAUAAGAUAAAAUUA A AUUUAAUAAUUUAU  CUUU       G CC     C      CG -       U      AG  -----U                   U A              -A    UAAUUGA |
Stem-loop sequence | UGUUUAGUUUCUAGAGACUAAUUUUUAGUCUCUUUAUUUUAUUUUAUUUUAUUUUAGUCUCUAAAUUAUUAAAUACAGAAACAAAAAUAGAGUUAAUUUUCAUAUUUAAUAAUUUAAAUAUUAAAAUAGAAUAAAAUGUAGGAACUAAAUAUUAGUCCGCAGAAACCAAACACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001112512.2 |
|
1.5 | Zea mays Aldose reductase (pco147797a), mRNA | NA | coding protein | psRNATarget |