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BaseInfo

ncRNA ID novel_zma_miR9681
Species Zea mays
Class miRNA
Genome position Chr5:112245468-112245519 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - AGGAUAUUUACACUGGCGGUUGGU - 24
Stem-loop(if miRNA) --A    A   A           -G U
   GGAU UUU CACUGGCGGUU  G G
   |||| ||| |||||||||||  | U
   UCUA AAA GUGACCGCCAA  C A
UAA    -   -           GA A
Stem-loop sequence AGGAUAUUUACACUGGCGGUUGGUGUAACAGAACCGCCAGUGAAAAUCUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UGGUUGGCGGUCACAUUUAUAGGA   1
  ||||||||||||||*|||||||||
targets:78   ACCAACCGCCAGUGGAAAUAUCCU   101

1.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget