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BaseInfo

ncRNA ID	novel_zma_miR9680
Species	Zea mays
Class	miRNA
Genome position	Chr10:99634581-99634635 [-]
Reference genome	RefGen_v4
Source	SRR4237225;SRR5105961
Length	24
Mature sequence(if miRNA)	1 - UUUGCCGAGUGUCUGCUGGACUAG - 24
Stem-loop(if miRNA)	--GC     G         A      C     UCCGG AGGCACUCG CAAAGG U     ||||| ||||||||| |||||| U     AGGUC UCUGUGAGC GUUUCU C GAUC     G         C      C
Stem-loop sequence	GCUCCGGGAGGCACUCGACAAAGGCUUCCUCUUUGCCGAGUGUCUGCUGGACUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406725.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   =*||||=|||||=||||||||||| targets:20   UCAGUCUAGCAGGCACUCGGCAAA   43 Target Full Sequence	2.5	Sequence 4850 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238855.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   =*||||=|||||=||||||||||| targets:20   UCAGUCUAGCAGGCACUCGGCAAA   43 Target Full Sequence	2.5	Sequence 4850 from Patent EP2985353	NA	coding protein	psRNATarget
JB167186.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   =*||||=|||||=||||||||||| targets:20   UCAGUCUAGCAGGCACUCGGCAAA   43 Target Full Sequence	2.5	Sequence 4850 from Patent EP2559767	NA	coding protein	psRNATarget
HI406450.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   |||*||||||||*||||||||||| targets:38   CUACUCCAGCAGUCACUCGGCAAA   61 Target Full Sequence	1.5	Sequence 4575 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238580.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   |||*||||||||*||||||||||| targets:38   CUACUCCAGCAGUCACUCGGCAAA   61 Target Full Sequence	1.5	Sequence 4575 from Patent EP2985353	NA	coding protein	psRNATarget
JB166911.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   |||*||||||||*||||||||||| targets:38   CUACUCCAGCAGUCACUCGGCAAA   61 Target Full Sequence	1.5	Sequence 4575 from Patent EP2559767	NA	coding protein	psRNATarget
HI406203.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   =|=|-||=|||||||||||||||| targets:23   UUGG-CCGGCAGACACUCGGCAAA   45 Target Full Sequence	1.0	Sequence 4328 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238333.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   =|=|-||=|||||||||||||||| targets:23   UUGG-CCGGCAGACACUCGGCAAA   45 Target Full Sequence	1.0	Sequence 4328 from Patent EP2985353	NA	coding protein	psRNATarget
JB166664.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   =|=|-||=|||||||||||||||| targets:23   UUGG-CCGGCAGACACUCGGCAAA   45 Target Full Sequence	1.0	Sequence 4328 from Patent EP2559767	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   *||*|||||*||=||||||||||| targets:690   AUACUCCAGGAGGCACUCGGCAAA   713 Target Full Sequence	2.5	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   GAUCAGGUCGUCUGUGAGCCGUUU   1   *|=*||=||**||||||||||||| targets:541   GUGUUCUAGGUGACACUCGGCAAA   564 Target Full Sequence	3.0	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget