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BaseInfo

ncRNA ID	novel_zma_miR9677
Species	Zea mays
Class	miRNA
Genome position	Chr5:215718486-215718577 [+]
Reference genome	RefGen_v4
Source	SRR4237225
Length	23
Mature sequence(if miRNA)	70 - AAUUCCGAAGGGGAUUUGAGGUU - 92
Stem-loop(if miRNA)	--A               AG    A   A       CA      UA    CUCAAAUCCCCUUCG  AUUG AGA GAUUGGA  GGAAAU  G    |||||||||||||||  |||| ||| |||||||  ||||||    GAGUUUAGGGGAAGC  UAAU UCU CUAACCU  CCUUUA  U UUG               CU    C   C       UA      CU
Stem-loop sequence	ACUCAAAUCCCCUUCGAGAUUGAAGAAGAUUGGACAGGAAAUUAGUUCAUUUCCAUUCCAAUCCUCUCUAAUUCCGAAGGGGAUUUGAGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT037634.1	ncRNA:23   UUGGAGUUUAGGGGAAGCCUUAA   1   |||||||||||||||||||=||| targets:225   AACCUCAAAUCCCCUUCGGGAUU   247 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0184G18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158145.1	ncRNA:23   UUGGAGUUUAGGGGAAGCCUUAA   1   |||||||||||||||||||=||| targets:995   AACCUCAAAUCCCCUUCGGGAUU   1017 Target Full Sequence	1.5	Zea mays transcription initiation factor TFIID subunit 11 (LOC100285251), mRNA	NA	coding protein	psRNATarget
EU971414.1	ncRNA:23   UUGGAGUUUAGGGGAAGCCUUAA   1   |||||||||||||||||||=||| targets:995   AACCUCAAAUCCCCUUCGGGAUU   1017 Target Full Sequence	1.5	Zea mays clone 364104 transcription initiation factor TFIID subunit 11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008679616.2	ncRNA:23   UUGGAGUUUAGGGGAAGCCUUAA   1   |||||||||||||||||||=||| targets:1137   AACCUCAAAUCCCCUUCGGGAUU   1159 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103652675 (LOC103652675), mRNA	NA	coding protein	psRNATarget
EU941872.1	ncRNA:23   UUGGAGUUUAGGGGAAGCCUUAA   1   ||*||||||||||||||||=||| targets:42   AAACUCAAAUCCCCUUCGGGAUU   64 Target Full Sequence	1.5	Zea mays clone 1471472 mRNA sequence	NA	coding protein	psRNATarget
XM_020545649.1	ncRNA:23   UUGGAGUUUAGGGGAAGCCUUAA   1   ||*||||||||||||||*||||| targets:662   AAACUCAAAUCCCCUUCAGAAUU   684 Target Full Sequence	1.5	PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109942989), transcript variant X5, mRNA	NA	coding protein	psRNATarget