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BaseInfo

ncRNA ID novel_zma_miR9667
Species Zea mays
Class miRNA
Genome position Chr4:222640724-222640848 [+]
Reference genome RefGen_v4
Source SRR4237225
Length 24
Mature sequence(if miRNA) 102 - AUUCCGGAACAAACGAACACACCC - 125
Stem-loop(if miRNA) --   C            ------------A  A  --  G   A GAAUAGUUCCAGAUGAUUAAAGCU
  GUG GUUCGUUUGUUU             GC UU  GA GUC U                        U
  ||| ||||||||||||             || ||  || ||| |                        A
  CAC CAAGCAAACAAG             AU CU  GU AAG U                        U
CC   A            GCCUUAAUACUAC  -  UG  U   - UAAUACUUACAAAUAGAUUAAACA
Stem-loop sequence GUGCGUUCGUUUGUUUAGCAUUGAGGUCAUGAAUAGUUCCAGAUGAUUAAAGCUUAUACAAAUUAGAUAAACAUUCAUAAUUGAAUUGGUUCUACAUCAUAAUUCCGGAACAAACGAACACACCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008681339.2
ncRNA:24   CCCACACAAGCAAACAAGGCCUUA   1
  |*||||*||||||||||||*||||
targets:1507   GAGUGUAUUCGUUUGUUCCAGAAU   1530

2.5 PREDICTED: Zea mays bisdemethoxycurcumin synthase-like (LOC103654510), mRNA NA coding protein psRNATarget