ncRNA ID | novel_zma_miR9662 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:9730299-9730396 [-] |
Reference genome | RefGen_v4 |
Source | SRR4237225 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGCACUCGGCAAAGAAACUCUUU - 24 |
Stem-loop(if miRNA) |
--   AGC               -----AUG      A            A   AGA   UCUUUGCCGAGUGUU        UAUUUG UACUCAGCAAAG A   |||   |||||||||||||||        |||||| |||||||||||| G   UCU   AGAAACGGCUCACGA        GUGAGC GUGAGUCGUUUC C UU   CAA               AAAAAAUU      A            U |
Stem-loop sequence | AGAAGCUCUUUGCCGAGUGUUAUGUAUUUGAUACUCAGCAAAGAAGCUCUUUGCUGAGUGACGAGUGUUAAAAAAAGCACUCGGCAAAGAAACUCUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LQ241915.1 |
|
2.0 | Sequence 7910 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB170246.1 |
|
2.0 | Sequence 7910 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
HI409785.1 |
|
2.0 | Sequence 7910 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
EU974507.1 |
|
2.5 | Zea mays clone 451014 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |