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BaseInfo

ncRNA ID osa-miRf10563-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CGAAGCCACGAAGGUUGAGCU - NA
Stem-loop(if miRNA)       C         A   A        - G G
GAGGGC GAGCUCAAC UUC UGGCUUCG U C A
|||||| ||||||||| ||| |||||||| | |
UUCCCG CUCGAGUUG AAG ACCGAAGC G G A
      A         G   C        A G A
Stem-loop sequence GAGGGCCGAGCUCAACAUUCAUGGCUUCGUGCGAAAGGGACGAAGCCACGAAGGUUGAGCUCAGCCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT832953.1
ncRNA:21   UCGAGUUGGAAGCACCGAAGC   1
  ||=|||||=||||||||||||
targets:523   AGUUCAACUUUCGUGGCUUCG   543

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN057J15, full insert sequence NA coding protein psRNATarget
AK099984.1
ncRNA:21   UCGAGUUGGAAGCACCGAAGC   1
  ||=|||||=||||||||||||
targets:542   AGUUCAACUUUCGUGGCUUCG   562

2.5 Oryza sativa Japonica Group cDNA clone:J013129L05, full insert sequence NA coding protein psRNATarget
AK065377.1
ncRNA:21   UCGAGUUGGAAGCACCGAAGC   1
  ||=|||||=||||||||||||
targets:525   AGUUCAACUUUCGUGGCUUCG   545

2.5 Oryza sativa Japonica Group cDNA clone:J013021M02, full insert sequence NA coding protein psRNATarget
XM_015756333.1
ncRNA:21   UCGAGUUGGAAGCACCGAAGC   1
  ||=|||||=||||||||||||
targets:535   AGUUCAACUUUCGUGGCUUCG   555

2.5 PREDICTED: Oryza sativa Japonica Group probable CCR4-associated factor 1 homolog 7 (LOC4347066), mRNA probable CCR4-associated factor 1 homolog 7(LOC4347066) coding protein psRNATarget