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BaseInfo

ncRNA ID novel_zma_miR9654
Species Zea mays
Class miRNA
Genome position Chr3:227329354-227329404 [+]
Reference genome RefGen_v4
Source SRR4237225
Length 22
Mature sequence(if miRNA) 1 - UAAUUAUUAACUUCCGAGGGGC - 22
Stem-loop(if miRNA) --UAAUU                 C
       AUUAACUUCCGAGGGGC G
       ||||||||||||||||| U
       UAAUUGAAGGCUCUCCG C
CAGUCGU                 C
Stem-loop sequence UAAUUAUUAACUUCCGAGGGGCCGUCCGCCUCUCGGAAGUUAAUUGCUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538899.1
ncRNA:22   CGGGGAGCCUUCAAUUAUUAAU   1
  *=|||||**|||||||||||||
targets:2453   AUCCCUCUUAAGUUAAUAAUUA   2474

2.0 PREDICTED: Zea mays uncharacterized LOC100279199 (LOC100279199), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020538898.1
ncRNA:22   CGGGGAGCCUUCAAUUAUUAAU   1
  *=|||||**|||||||||||||
targets:4543   AUCCCUCUUAAGUUAAUAAUUA   4564

2.0 PREDICTED: Zea mays uncharacterized LOC100279199 (LOC100279199), transcript variant X1, mRNA NA coding protein psRNATarget