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BaseInfo

ncRNA ID osa-miRf10562-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGCGCGGCAAGCUCUAGCUU - NA
Stem-loop(if miRNA) GUCU   AG G    CG     -           G  AAAUC   AACAAUAACCCAU
    UCU  U AAGU  GAGUU GCUGCGCUUUU UG     GGG             G
    |||  | ||||  ||||| ||||||||||| ||     |||             C
    AGA  G UUCG  CUCGA CGGCGCGAGGA AC     ACG             C
---C   GU G    AU     A           G  ---GU   AGCCGGAGGCGGA
Stem-loop sequence GUCUUCUAGUGAAGUCGGAGUUGCUGCGCUUUUGUGAAAUCGGGAACAAUAACCCAUGCCAGGCGGAGGCCGAGCAUGCAGAGGAGCGCGGCAAGCUCUAGCUUGGUGAGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK064844.1
ncRNA:20   UUCGAUCUCGAACGGCGCGA   1
  |||||=|||||*||||||||
targets:356   AAGCUGGAGCUCGCCGCGCU   375

2.5 Oryza sativa Japonica Group cDNA clone:J013000G08, full insert sequence NA coding protein psRNATarget
XM_015765972.1
ncRNA:20   UUCGAUCUCGAACGGCGCGA   1
  |||||=|||||*||||||||
targets:1077   AAGCUGGAGCUCGCCGCGCU   1096

2.5 PREDICTED: Oryza sativa Japonica Group probable calcium-binding protein CML12 (LOC4324100), transcript variant X3, mRNA probable calcium-binding protein CML12(LOC4324100) coding protein psRNATarget
XM_015765973.1
ncRNA:20   UUCGAUCUCGAACGGCGCGA   1
  |||||=|||||*||||||||
targets:1077   AAGCUGGAGCUCGCCGCGCU   1096

2.5 PREDICTED: Oryza sativa Japonica Group probable calcium-binding protein CML12 (LOC4324100), transcript variant X4, mRNA probable calcium-binding protein CML12(LOC4324100) coding protein psRNATarget
XM_015765974.1
ncRNA:20   UUCGAUCUCGAACGGCGCGA   1
  |||||=|||||*||||||||
targets:1077   AAGCUGGAGCUCGCCGCGCU   1096

2.5 PREDICTED: Oryza sativa Japonica Group probable calcium-binding protein CML12 (LOC4324100), transcript variant X5, mRNA probable calcium-binding protein CML12(LOC4324100) coding protein psRNATarget
XM_015765971.1
ncRNA:20   UUCGAUCUCGAACGGCGCGA   1
  |||||=|||||*||||||||
targets:1077   AAGCUGGAGCUCGCCGCGCU   1096

2.5 PREDICTED: Oryza sativa Japonica Group probable calcium-binding protein CML12 (LOC4324100), transcript variant X2, mRNA probable calcium-binding protein CML12(LOC4324100) coding protein psRNATarget