Search result

BaseInfo

ncRNA ID novel_zma_miR9635
Species Zea mays
Class miRNA
Genome position Chr1:47146190-47146365 [+]
Reference genome RefGen_v4
Source SRR4237225
Length 24
Mature sequence(if miRNA) 1 - AUACCGGAUGUAAAGAAUCUCUUU - 24
Stem-loop(if miRNA) --              GA   -                    A     GC  CU        UAA   ---     AAA     -UU   A
  AUACCGGAUGUAAA  AUC UCUUUUACAGUCCCUUAUAU CAUCA  UG  GGUCCAUA   AUA   UAAGA   ACAAA   ACU A
  ||||||||||||||  ||| |||||||||||||||||||| |||||  ||  ||||||||   |||   |||||   |||||   |||
  UAUGGCCUACAUUU  UAG AGAAAAUGUCAGGGAGUGUA GUGGU  AC  CCGGGUGU   UGU   GUUUU   UGUUU   UGG A
UG              -G   U                    G     AA  UU        UUC   CUA     AAA     UAU   G
Stem-loop sequence AUACCGGAUGUAAAGAAUCUCUUUUACAGUCCCUUAUAUACAUCAGCUGCUGGUCCAUAUAAAUAUAAGAAAAACAAAUUACUAAAGGGUUAUUUUGUAAAUUUUGAUCUGUCUUUGUGGGCCUUCAAAUGGUGGAUGUGAGGGACUGUAAAAGAUGAUGUUUACAUCCGGUAUGU